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  • Start Web-Ice (access through NXClient only)
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Next: Getting Started

Web-Ice

  • Getting Started
    • A brief introduction to Web-Ice
    • What is needed to run Web-Ice?
    • How to start Web-Ice
    • Web-Ice Interface
    • New features

  • Image Viewer
    • Selecting an Image File
    • Displaying the diffraction resolution
    • Adjusting Image Display
    • Image header
    • Analyzing the image

  • Autoindex and strategy calculation
    • The Runs page
    • Generating a new run
    • Executing the run
    • Viewing the run results
    • Initiating data collection

  • Data processing
    • User Datasets
    • Starting a processing run
    • Running data processing
    • Automated data processing
    • Processing results
    • Reprocessing the data

  • Screening Crystals
    • Cassette Summary
    • Cassette Details

  • Beamline status
    • Beamline Selection
    • Beamline Video
    • Experiment status
    • Experiment log

  • Preferences
    • Saving the Preferences
    • General Configuration
    • Image Viewer Configuration
    • Autoindex Configuration
    • Screening Configuration
    • Video Configuration

  • Troubleshooting
    • Q. I have typed the name of the image file in the File input box, but the JPEG file is not displayed and the right frame displays ''Failed to load image header''
    • Q. I get an HTTP error when trying to display or refresh a page
    • Q. In the Autoindex tab, the ''Runs'' table does not get loaded properly (the fields for the runs are empty); when trying to display the run contents, the browser displays an impersonation server error
    • Q. When I try to collect images or export a run to Blu-Ice, I get an error message saying that there are too many runs already. What does this mean?
    • Q. When I change the oscillation angle before Exporting the run to Blu-Ice, the exposure time changes when I recalculate the dose
    • Q. Autoindex/Screening fails with a MOSFLM error. What has happened?
    • Q. What do the System Errors displayed in the Spreadsheet mean?
    • Q. My crystal is pseudo-cubic, with the true symmetry being rhombohedral. I want to use Web-Ice to calculate the phi-rotation strategy, so I tried entering the known Laue group and unit cell in to the Autoindex run setup. This failed. Autoindexing also failed when I gave just the Laue group. How can I get the right strategy?
    • Q. How can I verify that the data collection strategy is calculated correctly?
    • Q. My buffer contains 1M NaCl and I have very small crystals. How do I account for that in the dose calculation?
    • Q. Why is the predicted resolution lower than I expected?

Technical questions: Webmaster    Content questions: Ana Gonzalez

Last modified:Tuesday, 13-Aug-2019 14:45:10 PDT.